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Summary of properties of promoter region AT5G54200


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G54200 protein Chr5:22014301 - 22017302 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G54200

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 22016450 22016455 cacatg BHLH
CCA1 motif1 BS in CAB1 22015054 22015063 aaacaatcta ...
Bellringer/replumless/pennywise BS1 IN AG 22015603 22015610 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 22016719 22016726 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 22016637 22016644 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 22015358 22015365 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 22014714 22014719 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 22015883 22015888 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 22015297 22015302 actcat bZIP
W-box promoter motif 22017222 22017227 ttgact WRKY
ARF1 binding site motif 22017259 22017264 tgtctc ARF
ATHB2 binding site motif 22016954 22016962 taataatta HB
CCA1 binding site motif 22014968 22014975 aaaaatct MYB-related
CCA1 binding site motif 22015055 22015062 aacaatct MYB-related
CCA1 binding site motif 22016030 22016037 aacaatct MYB-related
MYB1 binding site motif 22017235 22017242 ctccaacc MYB
MYB4 binding site motif 22014753 22014759 aactacc MYB
RAV1-A binding site motif 22014550 22014554 caaca ABI3VP1
RAV1-A binding site motif 22015864 22015868 caaca ABI3VP1
RAV1-A binding site motif 22016181 22016185 caaca ABI3VP1
RAV1-A binding site motif 22016795 22016799 caaca ABI3VP1
RAV1-A binding site motif 22016783 22016787 caaca ABI3VP1
RAV1-A binding site motif 22016732 22016736 caaca ABI3VP1
RAV1-A binding site motif 22016034 22016038 caaca ABI3VP1
RAV1-A binding site motif 22015839 22015843 caaca ABI3VP1
RAV1-A binding site motif 22015700 22015704 caaca ABI3VP1
RAV1-A binding site motif 22014956 22014960 caaca ABI3VP1
RAV1-A binding site motif 22014700 22014704 caaca ABI3VP1
LFY consensus binding site motif 22017162 22017167 ccattg LFY
LFY consensus binding site motif 22017162 22017167 ccaatg LFY
LFY consensus binding site motif 22016146 22016151 ccattg LFY
ABRE-like binding site motif 22015446 22015453 tacgtgta ...
ARF binding site motif 22017259 22017264 tgtctc ...
GATA promoter motif [LRE] 22016106 22016111 tgataa ...
GATA promoter motif [LRE] 22016787 22016792 tgataa ...
GATA promoter motif [LRE] 22016916 22016921 tgataa ...
GATA promoter motif [LRE] 22017280 22017285 tgataa ...
GATA promoter motif [LRE] 22015970 22015975 agataa ...
GATA promoter motif [LRE] 22015684 22015689 tgataa ...
GATA promoter motif [LRE] 22015432 22015437 tgataa ...
GATA promoter motif [LRE] 22015308 22015313 agatag ...
GATA promoter motif [LRE] 22015164 22015169 agataa ...
T-box promoter motif 22014504 22014509 actttg ...
T-box promoter motif 22016792 22016797 actttg ...
T-box promoter motif 22017263 22017268 actttg ...
T-box promoter motif 22016530 22016535 actttg ...
SORLREP3 22015550 22015558 tgtatatat ...
SORLREP3 22014455 22014463 tgtatatat ...

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