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Summary of properties of promoter region AT5G54910


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G54910 DEAD Chr5:22318944 - 22321945 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G54910

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 22319670 22319675 cacatg BHLH
AtMYC2 BS in RD22 22321431 22321436 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 22320640 22320647 aaattaaa Homeobox
Bellringer/replumless/pennywise BS2 IN AG 22319069 22319076 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 22319068 22319075 actaattt Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 22321790 22321795 actcat bZIP
W-box promoter motif 22321159 22321164 ttgact WRKY
W-box promoter motif 22320304 22320309 ttgact WRKY
ARF1 binding site motif 22321045 22321050 tgtctc ARF
ARF1 binding site motif 22321383 22321388 tgtctc ARF
ARF1 binding site motif 22320402 22320407 tgtctc ARF
ARF1 binding site motif 22319665 22319670 tgtctc ARF
ARF1 binding site motif 22319108 22319113 tgtctc ARF
DPBF1&2 binding site motif 22319657 22319663 acacgtg bZIP
DPBF1&2 binding site motif 22319669 22319675 acacatg bZIP
DPBF1&2 binding site motif 22320406 22320412 acacaag bZIP
DPBF1&2 binding site motif 22321829 22321835 acacaag bZIP
DPBF1&2 binding site motif 22321590 22321596 acaccgg bZIP
DPBF1&2 binding site motif 22321040 22321046 acacttg bZIP
MYB binding site promoter 22320047 22320054 aaccaaac MYB
MYB4 binding site motif 22319083 22319089 aacaaac MYB
MYB4 binding site motif 22319376 22319382 aactaac MYB
MYB4 binding site motif 22320525 22320531 accaacc MYB
MYB4 binding site motif 22320997 22321003 accaacc MYB
MYB4 binding site motif 22320047 22320053 accaaac MYB
RAV1-A binding site motif 22319199 22319203 caaca ABI3VP1
RAV1-A binding site motif 22320255 22320259 caaca ABI3VP1
RAV1-A binding site motif 22320461 22320465 caaca ABI3VP1
RAV1-A binding site motif 22320780 22320784 caaca ABI3VP1
RAV1-A binding site motif 22320893 22320897 caaca ABI3VP1
RAV1-A binding site motif 22321008 22321012 caaca ABI3VP1
RAV1-A binding site motif 22321114 22321118 caaca ABI3VP1
RAV1-A binding site motif 22321632 22321636 caaca ABI3VP1
RAV1-A binding site motif 22321821 22321825 caaca ABI3VP1
RAV1-A binding site motif 22319636 22319640 caaca ABI3VP1
RAV1-A binding site motif 22319445 22319449 caaca ABI3VP1
RAV1-A binding site motif 22319026 22319030 caaca ABI3VP1
RAV1-B binding site motif 22320560 22320565 cacctg ABI3VP1
LFY consensus binding site motif 22319643 22319648 ccactg LFY
LFY consensus binding site motif 22320895 22320900 ccaatg LFY
ARF binding site motif 22321045 22321050 tgtctc ...
ARF binding site motif 22321383 22321388 tgtctc ...
ARF binding site motif 22320402 22320407 tgtctc ...
ARF binding site motif 22319665 22319670 tgtctc ...
ARF binding site motif 22319108 22319113 tgtctc ...
BoxII promoter motif 22320740 22320745 ggttaa ...
GATA promoter motif [LRE] 22320019 22320024 agatag ...
GATA promoter motif [LRE] 22320080 22320085 agataa ...
GATA promoter motif [LRE] 22321687 22321692 agatag ...
GATA promoter motif [LRE] 22321838 22321843 tgatag ...
GATA promoter motif [LRE] 22320757 22320762 agatag ...
GATA promoter motif [LRE] 22320444 22320449 tgatag ...
GATA promoter motif [LRE] 22319417 22319422 tgataa ...
G-box promoter motif [LRE] 22319658 22319663 cacgtg ...
G-box promoter motif [LRE] 22319657 22319662 cacgtg ...
TELO-box promoter motif 22321852 22321860 aaaccctaa ...
SORLIP2 22320412 22320416 gggcc ...
SORLIP2 22321727 22321731 gggcc ...
SORLIP2 22321748 22321752 gggcc ...
SORLIP2 22320412 22320416 gggcc ...

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