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Summary of properties of promoter region AT5G55050


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G55050 GDSL-motif lipase Chr5:22351967 - 22354926 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G55050

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AG BS in SUP 22353780 22353789 ccatttttgg MADS
AP1 BS in SUP 22353780 22353789 ccatttttgg MADS
AtMYC2 BS in RD22 22354209 22354214 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 22352978 22352985 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 22353564 22353569 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 22354385 22354390 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 22351987 22351992 actcat bZIP
W-box promoter motif 22352852 22352857 ttgact WRKY
W-box promoter motif 22353394 22353399 ttgact WRKY
W-box promoter motif 22353724 22353729 ttgact WRKY
W-box promoter motif 22353966 22353971 ttgact WRKY
W-box promoter motif 22353251 22353256 ttgacc WRKY
CArG promoter motif 22353781 22353790 ccaaaaatgg MADS
CArG promoter motif 22353780 22353789 ccatttttgg MADS
ARF1 binding site motif 22353658 22353663 tgtctc ARF
ATHB2 binding site motif 22353681 22353689 taataatta HB
ATHB2 binding site motif 22353309 22353317 taataatta HB
ATHB2 binding site motif 22352699 22352707 taataatta HB
CCA1 binding site motif 22352657 22352664 aacaatct MYB-related
DPBF1&2 binding site motif 22353481 22353487 acacgcg bZIP
DPBF1&2 binding site motif 22354208 22354214 acacatg bZIP
MYB4 binding site motif 22352711 22352717 aacaaac MYB
MYB4 binding site motif 22352821 22352827 aactaac MYB
MYB4 binding site motif 22353637 22353643 accaaac MYB
MYB4 binding site motif 22354397 22354403 aacaacc MYB
MYB4 binding site motif 22353649 22353655 aacaacc MYB
RAV1-A binding site motif 22353751 22353755 caaca ABI3VP1
RAV1-A binding site motif 22354766 22354770 caaca ABI3VP1
RAV1-A binding site motif 22354109 22354113 caaca ABI3VP1
RAV1-A binding site motif 22353326 22353330 caaca ABI3VP1
RAV1-A binding site motif 22352067 22352071 caaca ABI3VP1
LFY consensus binding site motif 22352736 22352741 ccattg LFY
LFY consensus binding site motif 22353470 22353475 ccattg LFY
LFY consensus binding site motif 22352726 22352731 ccactg LFY
ARF binding site motif 22353658 22353663 tgtctc ...
BoxII promoter motif 22353643 22353648 ggttaa ...
BoxII promoter motif 22353355 22353360 ggttaa ...
DRE-like promoter motif 22353632 22353640 aaccgacca ...
GATA promoter motif [LRE] 22352041 22352046 tgatag ...
GATA promoter motif [LRE] 22352579 22352584 tgataa ...
GATA promoter motif [LRE] 22352601 22352606 tgatag ...
GATA promoter motif [LRE] 22353809 22353814 agataa ...
GATA promoter motif [LRE] 22353936 22353941 tgataa ...
GATA promoter motif [LRE] 22354076 22354081 tgataa ...
GATA promoter motif [LRE] 22354817 22354822 tgataa ...
GATA promoter motif [LRE] 22354245 22354250 agataa ...
GATA promoter motif [LRE] 22353738 22353743 tgatag ...
GATA promoter motif [LRE] 22353687 22353692 tgataa ...
GATA promoter motif [LRE] 22352506 22352511 tgatag ...
GATA promoter motif [LRE] 22352329 22352334 agatag ...
Ibox promoter motif 22352911 22352916 gataag ...
Ibox promoter motif 22352855 22352860 gataag ...
T-box promoter motif 22352228 22352233 actttg ...
T-box promoter motif 22352195 22352200 actttg ...
TELO-box promoter motif 22354440 22354448 aaaccctaa ...
SORLREP3 22352790 22352798 tgtatatat ...
SORLIP2 22353176 22353180 gggcc ...
SORLIP2 22353330 22353334 gggcc ...

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