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Summary of properties of promoter region AT5G56320


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G56320 expansin Chr5:22822864 - 22825866 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G56320

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 22825230 22825236 ctaacca MYB
AtMYC2 BS in RD22 22823967 22823972 cacatg BHLH
AtMYC2 BS in RD22 22824024 22824029 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 22825445 22825452 aaattaaa Homeobox
Bellringer/replumless/pennywise BS2 IN AG 22824044 22824051 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 22824043 22824050 actaattt Homeobox
W-box promoter motif 22824233 22824238 ttgacc WRKY
W-box promoter motif 22825550 22825555 ttgacc WRKY
W-box promoter motif 22825542 22825547 ttgacc WRKY
W-box promoter motif 22825164 22825169 ttgacc WRKY
W-box promoter motif 22824011 22824016 ttgacc WRKY
ARF1 binding site motif 22825406 22825411 tgtctc ARF
DPBF1&2 binding site motif 22825535 22825541 acacggg bZIP
DPBF1&2 binding site motif 22825776 22825782 acacttg bZIP
DPBF1&2 binding site motif 22825740 22825746 acactag bZIP
DPBF1&2 binding site motif 22824024 22824030 acacatg bZIP
DPBF1&2 binding site motif 22823465 22823471 acacaag bZIP
HSEs binding site motif 22825824 22825833 agaaatttct HSF
HSEs binding site motif 22825823 22825832 agaaatttct HSF
MYB4 binding site motif 22823219 22823225 aacaaac MYB
MYB4 binding site motif 22824859 22824865 aacaaac MYB
MYB4 binding site motif 22824367 22824373 accaacc MYB
RAV1-A binding site motif 22825168 22825172 caaca ABI3VP1
RAV1-A binding site motif 22825268 22825272 caaca ABI3VP1
RAV1-A binding site motif 22825046 22825050 caaca ABI3VP1
ARF binding site motif 22825406 22825411 tgtctc ...
BoxII promoter motif 22824576 22824581 ggttaa ...
GATA promoter motif [LRE] 22823324 22823329 tgataa ...
GATA promoter motif [LRE] 22824224 22824229 tgataa ...
GATA promoter motif [LRE] 22824286 22824291 tgataa ...
GATA promoter motif [LRE] 22824738 22824743 agataa ...
GATA promoter motif [LRE] 22825702 22825707 agatag ...
GATA promoter motif [LRE] 22825503 22825508 tgatag ...
GATA promoter motif [LRE] 22825201 22825206 agataa ...
GATA promoter motif [LRE] 22824929 22824934 agataa ...
GATA promoter motif [LRE] 22824632 22824637 tgatag ...
GATA promoter motif [LRE] 22823195 22823200 tgataa ...
GATA promoter motif [LRE] 22823189 22823194 agatag ...
Ibox promoter motif 22824739 22824744 gataag ...
Ibox promoter motif 22824419 22824424 gataag ...
T-box promoter motif 22823619 22823624 actttg ...
T-box promoter motif 22823678 22823683 actttg ...
T-box promoter motif 22824112 22824117 actttg ...
T-box promoter motif 22825024 22825029 actttg ...
T-box promoter motif 22824643 22824648 actttg ...
T-box promoter motif 22823732 22823737 actttg ...
T-box promoter motif 22823147 22823152 actttg ...
Z-box promoter motif 22822913 22822920 atacgtgt ...
SORLIP1 22825515 22825520 agccac ...
SORLIP2 22823476 22823480 gggcc ...

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