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Summary of properties of promoter region AT5G58420


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G58420 ribosomal protein S4 - like Chr5:23633734 - 23636731 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G58420

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 23634767 23634772 cacatg BHLH
AtMYC2 BS in RD22 23636503 23636508 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 23635035 23635042 aaattaaa Homeobox
Bellringer/replumless/pennywise BS2 IN AG 23634824 23634831 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 23634825 23634832 actaattt Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 23634177 23634182 actcat bZIP
W-box promoter motif 23635154 23635159 ttgact WRKY
W-box promoter motif 23634860 23634865 ttgacc WRKY
ARF1 binding site motif 23633828 23633833 tgtctc ARF
DPBF1&2 binding site motif 23634766 23634772 acacatg bZIP
DPBF1&2 binding site motif 23636502 23636508 acacatg bZIP
DPBF1&2 binding site motif 23635498 23635504 acactgg bZIP
MYB4 binding site motif 23635279 23635285 aacaaac MYB
MYB4 binding site motif 23635124 23635130 aacaaac MYB
MYB4 binding site motif 23634149 23634155 aacaaac MYB
MYB4 binding site motif 23633996 23634002 aactacc MYB
RAV1-A binding site motif 23636621 23636625 caaca ABI3VP1
RAV1-A binding site motif 23635660 23635664 caaca ABI3VP1
RAV1-A binding site motif 23635004 23635008 caaca ABI3VP1
RAV1-A binding site motif 23634323 23634327 caaca ABI3VP1
RAV1-A binding site motif 23634074 23634078 caaca ABI3VP1
LFY consensus binding site motif 23634688 23634693 ccattg LFY
LFY consensus binding site motif 23635499 23635504 ccagtg LFY
LFY consensus binding site motif 23635511 23635516 ccactg LFY
LFY consensus binding site motif 23636200 23636205 ccaatg LFY
ABRE-like binding site motif 23635644 23635651 tacgtgga ...
ABRE-like binding site motif 23634521 23634528 gacgtgta ...
ARF binding site motif 23633828 23633833 tgtctc ...
BoxII promoter motif 23636521 23636526 ggttaa ...
BoxII promoter motif 23634197 23634202 ggttaa ...
GATA promoter motif [LRE] 23633933 23633938 agataa ...
GATA promoter motif [LRE] 23635378 23635383 tgataa ...
GATA promoter motif [LRE] 23635490 23635495 agataa ...
GATA promoter motif [LRE] 23636048 23636053 tgataa ...
Ibox promoter motif 23634362 23634367 gataag ...
T-box promoter motif 23636216 23636221 actttg ...
T-box promoter motif 23636296 23636301 actttg ...
TELO-box promoter motif 23636718 23636726 aaaccctaa ...
SORLIP2 23636594 23636598 gggcc ...
SORLIP2 23636649 23636653 gggcc ...
SORLIP4 23635351 23635359 gtatgatgg ...

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