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Summary of properties of promoter region AT5G59560


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G59560 protein Chr5:24019181 - 24021113 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G59560

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
W-box promoter motif 24019860 24019865 ttgact WRKY
W-box promoter motif 24020960 24020965 ttgact WRKY
W-box promoter motif 24020556 24020561 ttgact WRKY
CArG promoter motif 24021047 24021056 cctttattgg MADS
CArG promoter motif 24021046 24021055 ccaataaagg MADS
ARF1 binding site motif 24021032 24021037 tgtctc ARF
ATHB6 binding site motif 24019459 24019467 caattatta HB
CCA1 binding site motif 24020255 24020262 aaaaatct MYB-related
CCA1 binding site motif 24019808 24019815 aaaaatct MYB-related
DPBF1&2 binding site motif 24019262 24019268 acacgtg bZIP
DPBF1&2 binding site motif 24020379 24020385 acacttg bZIP
DPBF1&2 binding site motif 24019264 24019270 acacacg bZIP
MYB1 binding site motif 24020034 24020041 ctccaacc MYB
MYB3 binding site motif 24019944 24019951 taactaac MYB
MYB4 binding site motif 24019945 24019951 aactaac MYB
RAV1-A binding site motif 24019590 24019594 caaca ABI3VP1
RAV1-A binding site motif 24019623 24019627 caaca ABI3VP1
RAV1-A binding site motif 24019769 24019773 caaca ABI3VP1
RAV1-A binding site motif 24019843 24019847 caaca ABI3VP1
RAV1-A binding site motif 24020743 24020747 caaca ABI3VP1
TGA1 binding site motif 24019292 24019299 tgacgtgg bZIP
LFY consensus binding site motif 24019574 24019579 ccactg LFY
LFY consensus binding site motif 24019919 24019924 ccaatg LFY
ABRE-like binding site motif 24019291 24019298 gacgtggc ...
ABRE-like binding site motif 24019260 24019267 cacgtgtc ...
ARF binding site motif 24021032 24021037 tgtctc ...
BoxII promoter motif 24019613 24019618 ggttaa ...
EveningElement promoter motif 24019216 24019224 aaaatatct ...
GATA promoter motif [LRE] 24019207 24019212 agataa ...
GATA promoter motif [LRE] 24019348 24019353 agatag ...
GATA promoter motif [LRE] 24021036 24021041 agatag ...
GATA promoter motif [LRE] 24019853 24019858 tgataa ...
GATA promoter motif [LRE] 24019282 24019287 agataa ...
G-box promoter motif [LRE] 24019263 24019268 cacgtg ...
G-box promoter motif [LRE] 24019262 24019267 cacgtg ...
Hexamer promoter motif 24019334 24019339 ccgtcg ...
Ibox promoter motif 24019281 24019286 gataag ...
T-box promoter motif 24020856 24020861 actttg ...
T-box promoter motif 24020709 24020714 actttg ...
T-box promoter motif 24019235 24019240 actttg ...
SORLIP1 24019291 24019296 agccac ...
SORLIP1 24019388 24019393 agccac ...
SORLIP2 24019399 24019403 gggcc ...
SORLIP2 24021055 24021059 gggcc ...
SORLIP2 24019749 24019753 gggcc ...

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