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Summary of properties of promoter region AT5G60410


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G60410 protein Chr5:24309448 - 24312115 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G60410

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 24310732 24310737 cacatg BHLH
AtMYC2 BS in RD22 24311382 24311387 cacatg BHLH
AtMYC2 BS in RD22 24311432 24311437 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 24312036 24312043 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 24311456 24311461 actcat bZIP
W-box promoter motif 24310275 24310280 ttgacc WRKY
W-box promoter motif 24311954 24311959 ttgact WRKY
W-box promoter motif 24310999 24311004 ttgact WRKY
W-box promoter motif 24309749 24309754 ttgact WRKY
CArG promoter motif 24311102 24311111 ccaaatttgg MADS
CArG promoter motif 24311101 24311110 ccaaatttgg MADS
ARF1 binding site motif 24311747 24311752 tgtctc ARF
ARF1 binding site motif 24311671 24311676 tgtctc ARF
ARF1 binding site motif 24309921 24309926 tgtctc ARF
ARF1 binding site motif 24309615 24309620 tgtctc ARF
DPBF1&2 binding site motif 24312004 24312010 acacagg bZIP
MYB binding site promoter 24310820 24310827 aaccaaac MYB
MYB4 binding site motif 24311844 24311850 aacaaac MYB
MYB4 binding site motif 24310820 24310826 accaaac MYB
RAV1-A binding site motif 24309879 24309883 caaca ABI3VP1
RAV1-A binding site motif 24309934 24309938 caaca ABI3VP1
RAV1-A binding site motif 24310145 24310149 caaca ABI3VP1
RAV1-A binding site motif 24311230 24311234 caaca ABI3VP1
RAV1-A binding site motif 24309763 24309767 caaca ABI3VP1
LFY consensus binding site motif 24310126 24310131 ccaatg LFY
ABRE-like binding site motif 24311359 24311366 tacgtgga ...
ARF binding site motif 24311747 24311752 tgtctc ...
ARF binding site motif 24311671 24311676 tgtctc ...
ARF binding site motif 24309921 24309926 tgtctc ...
ARF binding site motif 24309615 24309620 tgtctc ...
BoxII promoter motif 24311094 24311099 ggttaa ...
BoxII promoter motif 24311833 24311838 ggttaa ...
GATA promoter motif [LRE] 24310174 24310179 tgataa ...
GATA promoter motif [LRE] 24310241 24310246 agatag ...
GATA promoter motif [LRE] 24310396 24310401 agatag ...
GATA promoter motif [LRE] 24310652 24310657 tgataa ...
GATA promoter motif [LRE] 24310667 24310672 agatag ...
GATA promoter motif [LRE] 24311154 24311159 agataa ...
GATA promoter motif [LRE] 24311421 24311426 agataa ...
GATA promoter motif [LRE] 24311776 24311781 tgataa ...
GATA promoter motif [LRE] 24312051 24312056 tgataa ...
GATA promoter motif [LRE] 24311170 24311175 tgataa ...
GATA promoter motif [LRE] 24310778 24310783 tgataa ...
GATA promoter motif [LRE] 24310086 24310091 tgataa ...
GATA promoter motif [LRE] 24309993 24309998 agatag ...
G-box promoter motif [LRE] 24311995 24312000 cacgtg ...
G-box promoter motif [LRE] 24311994 24311999 cacgtg ...
Ibox promoter motif 24309905 24309910 gataag ...
Ibox promoter motif 24309971 24309976 gataag ...
Ibox promoter motif 24311169 24311174 gataag ...
Ibox promoter motif 24310085 24310090 gataag ...
T-box promoter motif 24309839 24309844 actttg ...
SORLREP2 24311880 24311888 ataaaacgt ...
SORLIP1 24310192 24310197 agccac ...
SORLIP1 24311583 24311588 agccac ...

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