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Summary of properties of promoter region AT5G62430


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G62430 Dof zinc finger protein Chr5:25087401 - 25090403 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G62430

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 25087774 25087780 ctaacca MYB
AtMYB2 BS in RD22 25087490 25087496 ctaacca MYB
AtMYC2 BS in RD22 25087654 25087659 cacatg BHLH
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 25089887 25089892 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 25090364 25090369 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 25089958 25089963 actcat bZIP
W-box promoter motif 25088349 25088354 ttgact WRKY
CArG promoter motif 25090262 25090271 ccaataaagg MADS
CArG promoter motif 25090261 25090270 cctttattgg MADS
ARF1 binding site motif 25089730 25089735 tgtctc ARF
CCA1 binding site motif 25088180 25088187 aaaaatct MYB-related
DPBF1&2 binding site motif 25087968 25087974 acacttg bZIP
DPBF1&2 binding site motif 25088477 25088483 acactgg bZIP
DPBF1&2 binding site motif 25089114 25089120 acacgag bZIP
HSEs binding site motif 25090341 25090350 agaaccttct HSF
HSEs binding site motif 25090340 25090349 agaaggttct HSF
MYB binding site promoter 25089401 25089408 aaccaaac MYB
MYB2 binding site motif 25087606 25087614 taactcgtt MYB
MYB3 binding site motif 25087602 25087609 taactaac MYB
MYB4 binding site motif 25087599 25087605 aactaac MYB
MYB4 binding site motif 25089078 25089084 accaacc MYB
MYB4 binding site motif 25089159 25089165 acctacc MYB
MYB4 binding site motif 25089661 25089667 aactacc MYB
MYB4 binding site motif 25089401 25089407 accaaac MYB
MYB4 binding site motif 25088788 25088794 accaaac MYB
RAV1-A binding site motif 25088143 25088147 caaca ABI3VP1
RAV1-A binding site motif 25088636 25088640 caaca ABI3VP1
RAV1-A binding site motif 25088699 25088703 caaca ABI3VP1
RAV1-A binding site motif 25089212 25089216 caaca ABI3VP1
RAV1-A binding site motif 25090134 25090138 caaca ABI3VP1
RAV1-A binding site motif 25088280 25088284 caaca ABI3VP1
RAV1-A binding site motif 25088069 25088073 caaca ABI3VP1
RAV1-A binding site motif 25087820 25087824 caaca ABI3VP1
RAV1-A binding site motif 25087574 25087578 caaca ABI3VP1
RAV1-B binding site motif 25088739 25088744 cacctg ABI3VP1
LFY consensus binding site motif 25087747 25087752 ccaatg LFY
LFY consensus binding site motif 25087837 25087842 ccattg LFY
LFY consensus binding site motif 25088266 25088271 ccattg LFY
LFY consensus binding site motif 25088833 25088838 ccaatg LFY
LFY consensus binding site motif 25088916 25088921 ccattg LFY
LFY consensus binding site motif 25088477 25088482 ccagtg LFY
LFY consensus binding site motif 25087874 25087879 ccattg LFY
ARF binding site motif 25089730 25089735 tgtctc ...
BoxII promoter motif 25089406 25089411 ggttaa ...
BoxII promoter motif 25088441 25088446 ggttaa ...
DRE-like promoter motif 25088339 25088347 aaccgacat ...
GATA promoter motif [LRE] 25087538 25087543 agataa ...
GATA promoter motif [LRE] 25088270 25088275 tgatag ...
GATA promoter motif [LRE] 25088300 25088305 tgataa ...
GATA promoter motif [LRE] 25088472 25088477 tgataa ...
GATA promoter motif [LRE] 25089219 25089224 agatag ...
GATA promoter motif [LRE] 25088878 25088883 agataa ...
GATA promoter motif [LRE] 25088133 25088138 agatag ...
Hexamer promoter motif 25089846 25089851 ccgtcg ...
Ibox promoter motif 25088877 25088882 gataag ...
LTRE promoter motif 25088340 25088346 accgaca ...
T-box promoter motif 25087622 25087627 actttg ...
T-box promoter motif 25088352 25088357 actttg ...
T-box promoter motif 25090376 25090381 actttg ...
T-box promoter motif 25089470 25089475 actttg ...
SORLIP2 25087683 25087687 gggcc ...

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