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Summary of properties of promoter region AT5G62550


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G62550 unknown protein Chr5:25125176 - 25127116 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G62550

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 25125852 25125857 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 25126241 25126248 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 25125449 25125456 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 25126338 25126343 actcat bZIP
W-box promoter motif 25125266 25125271 ttgact WRKY
W-box promoter motif 25126058 25126063 ttgacc WRKY
W-box promoter motif 25126073 25126078 ttgact WRKY
W-box promoter motif 25126535 25126540 ttgact WRKY
W-box promoter motif 25126274 25126279 ttgacc WRKY
CCA1 binding site motif 25126176 25126183 aaaaatct MYB-related
CCA1 binding site motif 25127061 25127068 aacaatct MYB-related
DPBF1&2 binding site motif 25126366 25126372 acactcg bZIP
E2F binding site motif 25126713 25126720 tttcccgc E2F-DP
MYB1 binding site motif 25125877 25125884 atcctacc MYB
MYB4 binding site motif 25125459 25125465 accaacc MYB
MYB4 binding site motif 25126517 25126523 aacaaac MYB
MYB4 binding site motif 25126265 25126271 aacaaac MYB
RAV1-A binding site motif 25125220 25125224 caaca ABI3VP1
RAV1-A binding site motif 25126736 25126740 caaca ABI3VP1
RAV1-A binding site motif 25126148 25126152 caaca ABI3VP1
RAV1-A binding site motif 25125985 25125989 caaca ABI3VP1
LFY consensus binding site motif 25126070 25126075 ccattg LFY
BoxII promoter motif 25126524 25126529 ggttaa ...
GATA promoter motif [LRE] 25125243 25125248 tgatag ...
GATA promoter motif [LRE] 25125592 25125597 tgataa ...
GATA promoter motif [LRE] 25125703 25125708 agataa ...
GATA promoter motif [LRE] 25125736 25125741 agataa ...
GATA promoter motif [LRE] 25126285 25126290 agatag ...
GATA promoter motif [LRE] 25126837 25126842 agataa ...
GATA promoter motif [LRE] 25126682 25126687 agatag ...
GATA promoter motif [LRE] 25125180 25125185 agatag ...

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